Plots the precursor collision energy vs. the fragment mass error in ppm.

Plots the precursor collision energy vs. the fragment mass error in ppm.

plotPrecCollEnergyVsMassErrorPpm(
  data,
  basename,
  plotFormat = "png",
  plotDimensions = list(width = 11.69, height = 8.27),
  color_scale = ggplot2::scale_colour_hue()
)

Arguments

data

the FIP data to plot.
basename

the basename (identifying a case) for the plot.
plotFormat

the format, passed to ggplot2::ggsave.
plotDimensions

the dimensions of the plot.
color_scale

the shared color scale to identify fragment and adduct pairs.

Value

the ggplot object.