Plots precursor collision energy vs. total scan intensity normalized relative fragment intensity overlaid on one panel.

Plots precursor collision energy vs. total scan intensity normalized relative fragment intensity overlaid on one panel.

plotPrecCollEnergyVsScanRelativeIntensityOverlay(
  data,
  basename,
  plotFormat = "png",
  plotDimensions = list(width = 11.69, height = 8.27),
  color_scale = ggplot2::scale_colour_hue()
)

Arguments

data	the FIP data to plot.
basename	the basename (identifying a case) for the plot.
plotFormat	the format, passed to ggplot2::ggsave.
plotDimensions	the dimensions of the plot.
color_scale	the shared color scale to identify fragment and adduct pairs.

Value

the ggplot object.