Uses of Package
de.isas.lipidomics.domain

Packages that use de.isas.lipidomics.domain

Package	Description
de.isas.lipidomics.domain	This package contains the main common domain models for lipids.
de.isas.lipidomics.palinom.goslin	This package contains the parser implementation for the Goslin grammar.
de.isas.lipidomics.palinom.goslinfragments	This package contains the parser implementation for the Goslin Fragments grammar.
de.isas.lipidomics.palinom.hmdb	This package contains the parser implementation for the HMDB grammar.
de.isas.lipidomics.palinom.lipidmaps	This package contains the parser implementation for the LipidMaps grammar.
de.isas.lipidomics.palinom.sumformula	This package contains the parser implementation for the SumFormula grammar.
de.isas.lipidomics.palinom.swisslipids	This package contains the parser implementation for the SwissLipids grammar.

Classes in de.isas.lipidomics.domain used by de.isas.lipidomics.domain

Class	Description
Adduct	An adduct, generally, consists of a sum formula part, an adduct string, the charge and the charge sign.
Element	Enumeration for typical chemical elements in lipids.
ElementTable	Accounting table for chemical element frequency.
FattyAcid	A fatty acid with a specific type.
FattyAcidType
Fragment	A generic lipid fragment.
HeadGroup	This class represents functional head groups of lipids.
LipidCategory	The lipid category nomenclature follows the shorthand notation of
LipidClass	This class was generated by the LipidClassGenerator.
LipidFaBondType	The lipid fatty acyl bond types define how the FA is connected to the head group or which variant of a particular bond type it is.
LipidLevel	Defines the taxonomy of lipid levels, including UNDEFINED for lipids where the level can not be inferred or does not apply.
LipidMolecularSubspecies	A molecular subspecies.
LipidSpecies	A lipid species is the factual root of the object hierarchy.
LipidSpeciesInfo	This class summarizes the FA parts of a lipid, independent of its head group.
LipidStructuralSubspecies	A structural subspecies.
ModificationsList

Classes in de.isas.lipidomics.domain used by de.isas.lipidomics.palinom.goslin

Class	Description
LipidAdduct	Base class for lipid names parsed using the different grammars.

Classes in de.isas.lipidomics.domain used by de.isas.lipidomics.palinom.goslinfragments

Class	Description
LipidAdduct	Base class for lipid names parsed using the different grammars.

Classes in de.isas.lipidomics.domain used by de.isas.lipidomics.palinom.hmdb

Class	Description
LipidAdduct	Base class for lipid names parsed using the different grammars.

Classes in de.isas.lipidomics.domain used by de.isas.lipidomics.palinom.lipidmaps

Class	Description
LipidAdduct	Base class for lipid names parsed using the different grammars.

Classes in de.isas.lipidomics.domain used by de.isas.lipidomics.palinom.sumformula

Class	Description
ElementTable	Accounting table for chemical element frequency.

Classes in de.isas.lipidomics.domain used by de.isas.lipidomics.palinom.swisslipids

Class	Description
LipidAdduct	Base class for lipid names parsed using the different grammars.