Package org.lifstools.jgoslin.domain
Class LipidStructureDefined
java.lang.Object
org.lifstools.jgoslin.domain.LipidSpecies
org.lifstools.jgoslin.domain.LipidMolecularSpecies
org.lifstools.jgoslin.domain.LipidSnPosition
org.lifstools.jgoslin.domain.LipidStructureDefined
- Direct Known Subclasses:
LipidFullStructure
Structure defined level according to the 2020 update of the Liebisch
shorthand nomenclature.
- Author:
- Dominik Kopczynski, Nils Hoffmann
- See Also:
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Field Summary
Fields inherited from class org.lifstools.jgoslin.domain.LipidSpecies
fa, faList, headGroup, info
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Constructor Summary
ConstructorDescriptionLipidStructureDefined
(Headgroup _headgroup, Collection<FattyAcid> _fa, KnownFunctionalGroups knownFunctionalGroups) LipidStructureDefined
(Headgroup _headgroup, KnownFunctionalGroups knownFunctionalGroups) -
Method Summary
Modifier and TypeMethodDescriptionReturns the normalized lipid string on the native level.getLipidString
(LipidLevel level) Returns the normalized lipid string on the provided level.Methods inherited from class org.lifstools.jgoslin.domain.LipidMolecularSpecies
buildLipidSubspeciesName, buildLipidSubspeciesName, getElements
Methods inherited from class org.lifstools.jgoslin.domain.LipidSpecies
getExtendedClass, getFaList, getHeadGroup, getInfo
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Constructor Details
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LipidStructureDefined
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LipidStructureDefined
public LipidStructureDefined(Headgroup _headgroup, Collection<FattyAcid> _fa, KnownFunctionalGroups knownFunctionalGroups)
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Method Details
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getLipidLevel
- Overrides:
getLipidLevel
in classLipidSnPosition
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getLipidString
Description copied from class:LipidSpecies
Returns the normalized lipid string on the native level.- Overrides:
getLipidString
in classLipidSnPosition
- Returns:
- the normalized lipid string.
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getLipidString
Description copied from class:LipidSpecies
Returns the normalized lipid string on the provided level.- Overrides:
getLipidString
in classLipidSnPosition
- Parameters:
level
- the lipid level at which the lipid string should be generated.- Returns:
- the normalized lipid string.
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