Uses of Class
uk.ac.ebi.pride.jmztab2.model.MZTabColumnFactory
-
Packages that use MZTabColumnFactory Package Description de.isas.mztab2.io This package contains implementations for reading and writing of mzTab-M files.uk.ac.ebi.pride.jmztab2.model This package contains model classes for mzTab-M structural features like mandatory and optional columns.uk.ac.ebi.pride.jmztab2.utils.parser This package contains text file line parser implementations for the mzTab-M document sections. -
-
Uses of MZTabColumnFactory in de.isas.mztab2.io
Methods in de.isas.mztab2.io with parameters of type MZTabColumnFactory Modifier and Type Method Description protected void
MzTabFileParser. checkColunitMapping(MZTabColumnFactory columnFactory, Optional<Collection<de.isas.mztab2.model.ColumnParameterMapping>> columnParameterMapping, de.isas.mztab2.model.Metadata.Properties colUnitProperty, de.isas.mztab2.model.MzTab.Properties mzTabSection)
-
Uses of MZTabColumnFactory in uk.ac.ebi.pride.jmztab2.model
Methods in uk.ac.ebi.pride.jmztab2.model that return MZTabColumnFactory Modifier and Type Method Description static MZTabColumnFactory
MZTabColumnFactory. getInstance(Section section)
Retrieves the MZTabColumnFactory accordingly to thesection
-
Uses of MZTabColumnFactory in uk.ac.ebi.pride.jmztab2.utils.parser
Fields in uk.ac.ebi.pride.jmztab2.utils.parser declared as MZTabColumnFactory Modifier and Type Field Description protected MZTabColumnFactory
MZTabDataLineParser. factory
protected MZTabColumnFactory
MZTabHeaderLineParser. factory
Methods in uk.ac.ebi.pride.jmztab2.utils.parser that return MZTabColumnFactory Modifier and Type Method Description MZTabColumnFactory
MZTabHeaderLineParser. getFactory()
Getter for the fieldfactory
.Constructors in uk.ac.ebi.pride.jmztab2.utils.parser with parameters of type MZTabColumnFactory Constructor Description MZTabDataLineParser(MZTabParserContext context, MZTabColumnFactory factory, PositionMapping positionMapping, de.isas.mztab2.model.Metadata metadata, uk.ac.ebi.pride.jmztab2.utils.errors.MZTabErrorList errorList)
Generate a mzTab data line parser.MZTabHeaderLineParser(MZTabParserContext context, MZTabColumnFactory factory, de.isas.mztab2.model.Metadata metadata)
Parse a header line intoMZTabColumnFactory
structure.PositionMapping(MZTabColumnFactory factory, String headerLine)
Constructor for PositionMapping.PositionMapping(MZTabColumnFactory factory, String[] headerList)
Constructor for PositionMapping.SMELineParser(MZTabParserContext context, MZTabColumnFactory factory, PositionMapping positionMapping, de.isas.mztab2.model.Metadata metadata, uk.ac.ebi.pride.jmztab2.utils.errors.MZTabErrorList errorList)
Constructor for SMELineParser.SMFLineParser(MZTabParserContext context, MZTabColumnFactory factory, PositionMapping positionMapping, de.isas.mztab2.model.Metadata metadata, uk.ac.ebi.pride.jmztab2.utils.errors.MZTabErrorList errorList)
Constructor for SMFLineParser.SMLLineParser(MZTabParserContext context, MZTabColumnFactory factory, PositionMapping positionMapping, de.isas.mztab2.model.Metadata metadata, uk.ac.ebi.pride.jmztab2.utils.errors.MZTabErrorList errorList)
Constructor for SMLLineParser.
-