handleMzTab(MetadataElement, Matcher, String, String) | | 34% | | 61% | 5 | 8 | 7 | 20 | 0 | 1 |
addMsRun(MZTabParserContext, Metadata, MetadataProperty, Integer, String, String) | | 57% | | 66% | 7 | 15 | 6 | 38 | 0 | 1 |
addAssay(MZTabParserContext, Metadata, MetadataProperty, String, String, Integer) | | 44% | | 53% | 7 | 10 | 8 | 27 | 0 | 1 |
addContact(MZTabParserContext, Metadata, MetadataProperty, Integer, String, String) | | 31% | | 62% | 3 | 6 | 5 | 18 | 0 | 1 |
addSoftware(MZTabParserContext, Metadata, MetadataProperty, String, String, Integer) | | 36% | | 58% | 5 | 7 | 4 | 16 | 0 | 1 |
addInstrument(MZTabParserContext, Metadata, MetadataProperty, Integer, Parameter) | | 51% | | 77% | 2 | 7 | 4 | 18 | 0 | 1 |
handleSmallMolecule(MetadataElement, Matcher, String, String) | | 39% | | 60% | 4 | 6 | 4 | 16 | 0 | 1 |
handleColunit(String, String) | | 62% | | 63% | 8 | 12 | 4 | 29 | 0 | 1 |
addDatabase(MZTabParserContext, Metadata, MetadataProperty, Integer, String, String) | | 49% | | 75% | 2 | 6 | 3 | 16 | 0 | 1 |
addStudyVariable(MZTabParserContext, Metadata, MetadataProperty, String, String, Integer) | | 70% | | 83% | 2 | 9 | 3 | 33 | 0 | 1 |
handleSmallMoleculeFeature(MetadataElement, Matcher, String, String) | | 35% | | 50% | 3 | 4 | 3 | 11 | 0 | 1 |
addCv(MZTabParserContext, Metadata, MetadataProperty, Integer, String) | | 46% | | 71% | 2 | 6 | 3 | 14 | 0 | 1 |
handleParam(String, String, MZTabErrorType, int, Consumer) | | 0% | | 0% | 4 | 4 | 7 | 7 | 1 | 1 |
parseNormalMetadata(String, String) | | 83% | | 89% | 3 | 26 | 2 | 55 | 0 | 1 |
checkIndexedElementList(String, String, MetadataElement) | | 27% | | 50% | 2 | 3 | 2 | 5 | 0 | 1 |
checkIndexedElement(String, String, MetadataElement) | | 21% | | 50% | 1 | 2 | 2 | 5 | 0 | 1 |
addSample(MZTabParserContext, Metadata, MetadataProperty, Integer, String, String) | | 74% | | 88% | 1 | 8 | 2 | 19 | 0 | 1 |
checkPublication(Integer, String, String) | | 64% | | 62% | 3 | 5 | 1 | 15 | 0 | 1 |
checkURI(String, String, boolean) | | 60% | | 83% | 1 | 4 | 1 | 8 | 0 | 1 |
addSampleProcessing(MZTabParserContext, Metadata, Integer, List) | | 25% | | 50% | 1 | 2 | 1 | 4 | 0 | 1 |
checkEmail(String, String) | | 20% | | 50% | 1 | 2 | 1 | 4 | 0 | 1 |
parse(int, String, MZTabErrorList) | | 62% | | 50% | 1 | 2 | 2 | 9 | 0 | 1 |
handleQuantificationMethod(String, String) | | 42% | | 50% | 1 | 2 | 1 | 5 | 0 | 1 |
handleDescription(String, String) | | 36% | | 50% | 1 | 2 | 1 | 4 | 0 | 1 |
handleTitle(String, String) | | 36% | | 50% | 1 | 2 | 1 | 4 | 0 | 1 |
handleAssay(Matcher, String, MetadataElement, String) | | 86% | | 50% | 1 | 2 | 1 | 6 | 0 | 1 |
checkIndex(String, String) | | 91% | | 50% | 1 | 2 | 1 | 7 | 0 | 1 |
handleExternalStudyUri(String, Matcher, String) | | 93% | | 50% | 1 | 2 | 0 | 5 | 0 | 1 |
handleUri(String, Matcher, String, boolean) | | 93% | | 50% | 1 | 2 | 0 | 5 | 0 | 1 |
refineNormalMetadata() | | 100% | | n/a | 0 | 1 | 0 | 13 | 0 | 1 |
checkProperty(MetadataElement, String) | | 100% | | 100% | 0 | 3 | 0 | 8 | 0 | 1 |
checkParameterList(String, String) | | 100% | | 100% | 0 | 2 | 0 | 4 | 0 | 1 |
checkParameter(String, String) | | 100% | | 100% | 0 | 2 | 0 | 4 | 0 | 1 |
handleInstrument(String, Matcher, MetadataElement, String) | | 100% | | n/a | 0 | 1 | 0 | 5 | 0 | 1 |
handleDatabase(String, Matcher, MetadataElement, String) | | 100% | | n/a | 0 | 1 | 0 | 4 | 0 | 1 |
handleStudyVariable(String, Matcher, MetadataElement, String) | | 100% | | n/a | 0 | 1 | 0 | 4 | 0 | 1 |
handleSample(String, Matcher, MetadataElement, String) | | 100% | | n/a | 0 | 1 | 0 | 4 | 0 | 1 |
handleMsRun(String, Matcher, MetadataElement, String) | | 100% | | n/a | 0 | 1 | 0 | 4 | 0 | 1 |
handleContact(String, Matcher, MetadataElement, String) | | 100% | | n/a | 0 | 1 | 0 | 4 | 0 | 1 |
handleSoftware(String, Matcher, MetadataElement, String) | | 100% | | n/a | 0 | 1 | 0 | 4 | 0 | 1 |
handleCv(String, Matcher, MetadataElement, String) | | 100% | | n/a | 0 | 1 | 0 | 4 | 0 | 1 |
handleCustom(String, Matcher, String) | | 100% | | n/a | 0 | 1 | 0 | 3 | 0 | 1 |
handleDerivatizationAgent(String, Matcher, String) | | 100% | | n/a | 0 | 1 | 0 | 3 | 0 | 1 |
handleSampleProcessing(String, Matcher, String) | | 100% | | n/a | 0 | 1 | 0 | 3 | 0 | 1 |
handleIdConfidenceMeasure(String, Matcher, String) | | 100% | | n/a | 0 | 1 | 0 | 3 | 0 | 1 |
lambda$addStudyVariable$2(String, IndexedElement) | | 100% | | n/a | 0 | 1 | 0 | 2 | 0 | 1 |
handlePublication(String, Matcher, String) | | 100% | | n/a | 0 | 1 | 0 | 3 | 0 | 1 |
static {...} | | 100% | | n/a | 0 | 1 | 0 | 2 | 0 | 1 |
MTDLineParser(MZTabParserContext) | | 100% | | n/a | 0 | 1 | 0 | 3 | 0 | 1 |
lambda$addStudyVariable$1(List, IndexedElement) | | 100% | | 100% | 0 | 2 | 0 | 1 | 0 | 1 |
validate(Object, MetadataValidator, MZTabParserContext, MZTabErrorList) | | 100% | | n/a | 0 | 1 | 0 | 2 | 0 | 1 |
lambda$validate$0(MZTabErrorList, MZTabError) | | 100% | | n/a | 0 | 1 | 0 | 2 | 0 | 1 |
getMetadata() | | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |