All Packages

Package Summary

Package	Description
de.isas.lipidomics.mztab2.validation	This package contains classes that provide the basic validator infrastructure used in the jmztabm-validation module.
de.isas.lipidomics.mztab2.validation.constraints	This package contains custom validation annotations for the javax.validation framework.
de.isas.lipidomics.mztab2.validation.validators	This package contains custom validators that implement the
de.isas.mztab2.cli	This package contains the command line interface for jmzTab-M validation and conversion.
de.isas.mztab2.cvmapping	This package contains classes for controlled vocabulary term access, comparison, results and external cv parameter resolution.
de.isas.mztab2.io	This package contains implementations for reading and writing of mzTab-M files.
de.isas.mztab2.io.formats	This package defines formats for Jackson that define, which serializer should be used for a particular object type.
de.isas.mztab2.io.serialization	This package contains classes that implement custom Jackson serializers for the mzTab-M model objects.
de.isas.mztab2.io.validators	This package contains implementations for validation of mzTab-M parts during parsing.
de.isas.mztab2.model	Base package for the jmztab-m data model, generated from the mzTab_m_swagger.yml specification.
de.isas.mztab2.test.utils	This package contains custom JUnit Rules for extraction of class path resource files and additional logging for testing.
de.isas.mztab2.validation	This package contains interfaces and implementations for the semantic validation via CvTerms.
de.isas.mztab2.validation.handlers	This package contains implementations for the semantic validation controlled vocabulary term rules.
info.psidev.cvmapping	This package contains the generated Java objects created via XML binding from the PSI-MS mapping file schema.
uk.ac.ebi.pride.jmztab2	This package contains jmzTab-M model and utility classes that were adapted from the original jmzTab implementation.
uk.ac.ebi.pride.jmztab2.model	This package contains model classes for mzTab-M structural features like mandatory and optional columns.
uk.ac.ebi.pride.jmztab2.utils	This package contains the property file mapping for mzTab-M's validation messages.
uk.ac.ebi.pride.jmztab2.utils.errors	This package contains error type definitions and related classes used during mzTab validation.
uk.ac.ebi.pride.jmztab2.utils.parser	This package contains text file line parser implementations for the mzTab-M document sections.