Uses of Class
de.isas.mztab2.model.Instrument

Packages that use Instrument

Package	Description
de.isas.mztab2.io.serialization	This package contains classes that implement custom Jackson serializers for the mzTab-M model objects.
de.isas.mztab2.model	Base package for the jmztab-m data model, generated from the mzTab_m_swagger.yml specification.
uk.ac.ebi.pride.jmztab2.utils.parser	This package contains text file line parser implementations for the mzTab-M document sections.

Uses of Instrument in de.isas.mztab2.io.serialization

Methods in de.isas.mztab2.io.serialization with parameters of type Instrument

Modifier and Type	Method	Description
void	InstrumentSerializer.serialize(Instrument instrument, com.fasterxml.jackson.core.JsonGenerator jg, com.fasterxml.jackson.databind.SerializerProvider sp)
void	InstrumentSerializer.serializeWithType(Instrument value, com.fasterxml.jackson.core.JsonGenerator gen, com.fasterxml.jackson.databind.SerializerProvider serializers, com.fasterxml.jackson.databind.jsontype.TypeSerializer typeSer)

Constructor parameters in de.isas.mztab2.io.serialization with type arguments of type Instrument

Constructor	Description
InstrumentSerializer(Class<Instrument> t)	Constructor for InstrumentSerializer.

Uses of Instrument in de.isas.mztab2.model

Methods in de.isas.mztab2.model that return Instrument

Modifier and Type	Method	Description
Instrument	Instrument.addAnalyzerItem(Parameter analyzerItem)	Add a single analyzerItem to the analyzer collection.
Instrument	Instrument.analyzer(List<Parameter> analyzer)	Builder method for analyzer.
Instrument	Instrument.detector(Parameter detector)	Builder method for detector.
Instrument	Instrument.elementType(String elementType)
@Valid Instrument	MsRun.getInstrumentRef()	The instrument on which this msRun was measured.
Instrument	Instrument.id(Integer id)
Instrument	Instrument.name(Parameter name)	Builder method for name.
Instrument	Instrument.source(Parameter source)	Builder method for source.

Methods in de.isas.mztab2.model that return types with arguments of type Instrument

Modifier and Type	Method	Description
@Valid List<Instrument>	Metadata.getInstrument()	The name, source, analyzer and detector of the instruments used in the experiment.

Methods in de.isas.mztab2.model with parameters of type Instrument

Modifier and Type	Method	Description
Metadata	Metadata.addInstrumentItem(Instrument instrumentItem)	Add a single instrumentItem to the instrument collection.
MsRun	MsRun.instrumentRef(Instrument instrumentRef)	Builder method for instrumentRef.
void	MsRun.setInstrumentRef(Instrument instrumentRef)	Set instrumentRef.

Method parameters in de.isas.mztab2.model with type arguments of type Instrument

Modifier and Type	Method	Description
Metadata	Metadata.instrument(List<Instrument> instrument)	Builder method for instrument.
void	Metadata.setInstrument(List<Instrument> instrument)	Set instrument.

Uses of Instrument in uk.ac.ebi.pride.jmztab2.utils.parser

Methods in uk.ac.ebi.pride.jmztab2.utils.parser that return Instrument

Modifier and Type	Method	Description
Instrument	MZTabParserContext.addInstrument(Metadata metadata, Instrument instrument)	Add a instrument[id] to metadata.
Instrument	MZTabParserContext.addInstrumentAnalyzer(Metadata metadata, Integer id, Parameter analyzer)	Add a parameter for instrument[id]-analyzer[i]
Instrument	MZTabParserContext.addInstrumentDetector(Metadata metadata, Integer id, Parameter detector)	Add a parameter for instrument[id]-detector
Instrument	MZTabParserContext.addInstrumentName(Metadata metadata, Integer id, Parameter name)	Add a parameter for instrument[id]-name
Instrument	MZTabParserContext.addInstrumentSource(Metadata metadata, Integer id, Parameter source)	Add a parameter for instrument[id]-source

Methods in uk.ac.ebi.pride.jmztab2.utils.parser with parameters of type Instrument

Modifier and Type	Method	Description
Instrument	MZTabParserContext.addInstrument(Metadata metadata, Instrument instrument)	Add a instrument[id] to metadata.
MsRun	MZTabParserContext.addMsRunInstrumentRef(Metadata metadata, Integer id, Instrument instrument)	Add ms_run[id]-instrument_ref into metadata.