Package uk.ac.ebi.pride.jmztab2.utils.parser

Class COMLineParser

java.lang.Object

uk.ac.ebi.pride.jmztab2.utils.parser.MZTabLineParser

uk.ac.ebi.pride.jmztab2.utils.parser.COMLineParser

public class COMLineParser
extends MZTabLineParser

Comment line parser. Comment lines can be placed anywhere in an mzTab file. These lines must start with the three-letter code COM and are ignored by most parsers. Empty lines can also occur anywhere in an mzTab file and are ignored.

Since:

10/02/13

Author:

qingwei

See Also:

MZTabLineParser

Field Summary

Fields inherited from class uk.ac.ebi.pride.jmztab2.utils.parser.MZTabLineParser

context, errorList, items, line, lineNumber, section

Constructor Summary

Constructors

Constructor	Description
COMLineParser(MZTabParserContext context)	Constructor for COMLineParser.

Method Summary

Modifier and Type	Method	Description
Comment	getComment()	getComment.
void	parse(int lineNumber, String line, MZTabErrorList errorList)	We assume that user before call this method, have parse the raw line is not empty line and start with section prefix.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

COMLineParser

public COMLineParser(MZTabParserContext context)

Constructor for COMLineParser.

Parameters:

context - a MZTabParserContext object.

Method Detail

parse

public void parse(int lineNumber,
                  String line,
                  MZTabErrorList errorList)
           throws MZTabException

We assume that user before call this method, have parse the raw line is not empty line and start with section prefix.

Overrides:

parse in class MZTabLineParser

Parameters:

lineNumber - a int.

line - a String object.

errorList - a MZTabErrorList object.

Throws:

MZTabException - if any.

getComment

public Comment getComment()

getComment.

Returns:

a Comment object.