| equals(Object) |  | 0% | | 0% | 64 | 64 | 1 | 1 | 1 | 1 |
| hashCode() | | 0% | | 0% | 21 | 21 | 1 | 1 | 1 | 1 |
| toString() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| addPublicationItem(Metadata, Integer, PublicationItem.TypeEnum, String) | | 0% | | 0% | 5 | 5 | 15 | 15 | 1 | 1 |
| addPublicationItems(Metadata, Integer, Collection) | | 0% | | 0% | 4 | 4 | 13 | 13 | 1 | 1 |
| addSampleProcessingParameter(Metadata, Integer, Parameter) | | 0% | | 0% | 4 | 4 | 13 | 13 | 1 | 1 |
| addAssayExternalUri(Metadata, Integer, URI) | | 0% | | 0% | 4 | 4 | 11 | 11 | 1 | 1 |
| addAssayCustom(Metadata, Integer, Parameter) | | 0% | | 0% | 3 | 3 | 11 | 11 | 1 | 1 |
| addDatabaseUri(Metadata, Integer, URI) |  | 39% | | 50% | 3 | 5 | 6 | 11 | 0 | 1 |
| addContactEmail(Metadata, Integer, String) | | 37% | | 50% | 3 | 4 | 7 | 13 | 0 | 1 |
| addMsRunHash(Metadata, Integer, String) | | 37% | | 50% | 3 | 4 | 7 | 13 | 0 | 1 |
| addMsRunInstrumentRef(Metadata, Integer, Instrument) | | 36% | | 50% | 3 | 4 | 7 | 13 | 0 | 1 |
| addSampleTissue(Metadata, Integer, Parameter) | | 38% | | 50% | 3 | 4 | 7 | 13 | 0 | 1 |
| addSampleCellType(Metadata, Integer, Parameter) | | 38% | | 50% | 3 | 4 | 7 | 13 | 0 | 1 |
| addSampleDisease(Metadata, Integer, Parameter) | | 38% | | 50% | 3 | 4 | 7 | 13 | 0 | 1 |
| addSampleCustom(Metadata, Integer, Parameter) | | 38% | | 50% | 3 | 4 | 7 | 13 | 0 | 1 |
| addMsRunFragmentationMethod(Metadata, Integer, Parameter) | | 38% | | 50% | 3 | 4 | 7 | 13 | 0 | 1 |
| addMsRunScanPolarity(Metadata, Integer, Parameter) | | 38% | | 50% | 3 | 4 | 7 | 13 | 0 | 1 |
| addMsRunIdFormat(Metadata, Integer, Parameter) | | 38% | | 50% | 3 | 4 | 7 | 13 | 0 | 1 |
| addMsRunHashMethod(Metadata, Integer, Parameter) | | 38% | | 50% | 3 | 4 | 7 | 13 | 0 | 1 |
| addStudyVariableVariationFunction(Metadata, Integer, Parameter) | | 38% | | 50% | 3 | 4 | 7 | 13 | 0 | 1 |
| addStudyVariableAverageFunction(Metadata, Integer, Parameter) | | 38% | | 50% | 3 | 4 | 7 | 13 | 0 | 1 |
| addInstrumentAnalyzer(Metadata, Integer, Parameter) | | 42% | | 66% | 2 | 4 | 6 | 13 | 0 | 1 |
| addDatabasePrefix(Metadata, Integer, String) | | 37% | | 50% | 2 | 3 | 6 | 11 | 0 | 1 |
| addDatabaseVersion(Metadata, Integer, String) | | 37% | | 50% | 2 | 3 | 6 | 11 | 0 | 1 |
| addInstrument(Metadata, Instrument) | | 0% | | 0% | 2 | 2 | 5 | 5 | 1 | 1 |
| addSoftware(Metadata, Software) | | 0% | | 0% | 2 | 2 | 5 | 5 | 1 | 1 |
| addContact(Metadata, Contact) | | 0% | | 0% | 2 | 2 | 5 | 5 | 1 | 1 |
| addCV(Metadata, CV) | | 0% | | 0% | 2 | 2 | 5 | 5 | 1 | 1 |
| addSmallMoleculeFeatureColUnit(Metadata, String, Parameter) | | 0% | | n/a | 1 | 1 | 5 | 5 | 1 | 1 |
| addStudyVariableFactors(Metadata, Integer, Parameter) | | 56% | | 50% | 3 | 4 | 5 | 12 | 0 | 1 |
| addCVVersion(Metadata, Integer, String) | | 55% | | 50% | 2 | 3 | 4 | 9 | 0 | 1 |
| addCVURI(Metadata, Integer, String) | | 55% | | 50% | 2 | 3 | 4 | 9 | 0 | 1 |
| addAssayMsRun(Metadata, Integer, MsRun) | | 75% | | 62% | 3 | 5 | 3 | 15 | 0 | 1 |
| addStudyVariableAssay(Metadata, Integer, Assay) | | 75% | | 62% | 3 | 5 | 3 | 15 | 0 | 1 |
| addAssaySample(Metadata, Integer, Sample) | | 75% | | 62% | 3 | 5 | 3 | 15 | 0 | 1 |
| addContactName(Metadata, Integer, String) | | 74% | | 50% | 3 | 4 | 3 | 13 | 0 | 1 |
| addInstrumentName(Metadata, Integer, Parameter) | | 77% | | 50% | 3 | 4 | 3 | 13 | 0 | 1 |
| addContactAffiliation(Metadata, Integer, String) | | 80% | | 66% | 2 | 4 | 2 | 13 | 0 | 1 |
| addSoftwareParameter(Metadata, Integer, Parameter) | | 78% | | 50% | 3 | 4 | 3 | 13 | 0 | 1 |
| addSoftwareSetting(Metadata, Integer, String) | | 86% | | 66% | 2 | 4 | 2 | 13 | 0 | 1 |
| addSampleSpecies(Metadata, Integer, Parameter) | | 85% | | 66% | 2 | 4 | 2 | 13 | 0 | 1 |
| addSampleDescription(Metadata, Integer, String) | | 85% | | 66% | 2 | 4 | 2 | 13 | 0 | 1 |
| addInstrumentSource(Metadata, Integer, Parameter) | | 85% | | 66% | 2 | 4 | 2 | 13 | 0 | 1 |
| addInstrumentDetector(Metadata, Integer, Parameter) | | 85% | | 66% | 2 | 4 | 2 | 13 | 0 | 1 |
| addMsRunFormat(Metadata, Integer, Parameter) | | 85% | | 66% | 2 | 4 | 2 | 13 | 0 | 1 |
| addStudyVariableDescription(Metadata, Integer, String) | | 84% | | 66% | 2 | 4 | 2 | 12 | 0 | 1 |
| addSampleProcessing(Metadata, Integer, List) | | 80% | | 50% | 2 | 3 | 2 | 10 | 0 | 1 |
| addMsRunLocation(Metadata, Integer, URI) | | 89% | | 83% | 1 | 4 | 1 | 11 | 0 | 1 |
| addCVLabel(Metadata, Integer, String) | | 86% | | 50% | 2 | 3 | 1 | 9 | 0 | 1 |
| addCVFullName(Metadata, Integer, String) | | 86% | | 75% | 1 | 3 | 1 | 9 | 0 | 1 |
| addSample(Metadata, Sample) | | 75% | | 50% | 1 | 2 | 1 | 5 | 0 | 1 |
| addPublication(Metadata, Publication) | | 75% | | 50% | 1 | 2 | 1 | 5 | 0 | 1 |
| addMsRun(Metadata, MsRun) | | 75% | | 50% | 1 | 2 | 1 | 5 | 0 | 1 |
| addAssay(Metadata, Assay) | | 75% | | 50% | 1 | 2 | 1 | 5 | 0 | 1 |
| addStudyVariable(Metadata, StudyVariable) | | 75% | | 50% | 1 | 2 | 1 | 5 | 0 | 1 |
| addDatabase(Metadata, Database) | | 75% | | 50% | 1 | 2 | 1 | 5 | 0 | 1 |
| setSampleProcessingMap(SortedMap) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setInstrumentMap(SortedMap) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setSoftwareMap(SortedMap) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setPublicationMap(SortedMap) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setContactMap(SortedMap) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setQuantificationMethod(Parameter) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setAssayMap(SortedMap) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setSmallMoleculeQuantificationUnit(Parameter) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setMsRunMap(SortedMap) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setCustomItemMap(SortedMap) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setDerivatizationItemMap(SortedMap) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setIdConfidenceMeasureMap(SortedMap) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setSampleMap(SortedMap) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setStudyVariableMap(SortedMap) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setCvMap(SortedMap) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setDatabaseMap(SortedMap) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setSmallMoleculeColUnitList(List) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setSmallMoleculeFeatureColUnitList(List) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setSmallMoleculeEvidenceColUnitList(List) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| setColUnitMap(Map) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| getColUnitMap() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| getContactMap() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| getQuantificationMethod() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| getSmallMoleculeQuantificationUnit() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| getCustomItemMap() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| getDerivatizationItemMap() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| getSmallMoleculeColUnitList() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| getSmallMoleculeFeatureColUnitList() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| getSmallMoleculeEvidenceColUnitList() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| canEqual(Object) | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
| addCustomItem(Metadata, Integer, Parameter) | | 90% | | 50% | 2 | 3 | 1 | 7 | 0 | 1 |
| addDerivatizationAgentItem(Metadata, Integer, Parameter) | | 90% | | 50% | 2 | 3 | 1 | 7 | 0 | 1 |
| MZTabParserContext() | | 100% | | n/a | 0 | 1 | 0 | 19 | 0 | 1 |
| addSmallMoleculeColUnit(Metadata, String, Parameter) | | 100% | | n/a | 0 | 1 | 0 | 5 | 0 | 1 |
| addSmallMoleculeEvidenceColUnit(Metadata, String, Parameter) | | 100% | | n/a | 0 | 1 | 0 | 5 | 0 | 1 |
| addIdConfidenceMeasure(Metadata, Integer, Parameter) | | 100% | | 50% | 1 | 2 | 0 | 5 | 0 | 1 |
| getSampleProcessingMap() | | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
| getInstrumentMap() | | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
| getSoftwareMap() | | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
| getPublicationMap() | | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
| getAssayMap() | | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
| getMsRunMap() | | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
| getIdConfidenceMeasureMap() | | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
| getSampleMap() | | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
| getStudyVariableMap() | | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
| getCvMap() | | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
| getDatabaseMap() | | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |