Uses of Interface
de.isas.lipidomics.mztab2.validation.Validator

Packages that use Validator

Package	Description
de.isas.lipidomics.mztab2.validation	This package contains classes that provide the basic validator infrastructure used in the jmztabm-validation module.
de.isas.mztab2.io	This package contains implementations for reading and writing of mzTab-M files.
de.isas.mztab2.validation	This package contains interfaces and implementations for the semantic validation via CvTerms.

Uses of Validator in de.isas.lipidomics.mztab2.validation

Classes in de.isas.lipidomics.mztab2.validation that implement Validator

Modifier and Type	Class	Description
class	MzTabValidator	Delegating validator implementation that forwards validation to the provided validator implementations.

Methods in de.isas.lipidomics.mztab2.validation with parameters of type Validator

Modifier and Type	Method	Description
static List<ValidationMessage>	MzTabValidator.validate(MzTab mzTab, ValidationMessage.MessageTypeEnum validationLevel, Validator<MzTab>... validators)	Validate the given mzTab object, filtering messages that are of a lower level than the given one.

Constructors in de.isas.lipidomics.mztab2.validation with parameters of type Validator

Constructor	Description
MzTabValidator(Validator<MzTab>... validator)

Uses of Validator in de.isas.mztab2.io

Classes in de.isas.mztab2.io that implement Validator

Modifier and Type	Class	Description
static class	MzTabValidatingWriter.WriteAndParseValidator	A default validator implemenation that first writes and then parses the created temporary file, performing the parser checks.

Constructors in de.isas.mztab2.io with parameters of type Validator

Constructor	Description
MzTabValidatingWriter(Validator<MzTab> validator, boolean skipWriteOnValidationFailure)	Uses the provided validator and default writer configuration.
MzTabValidatingWriter(Validator<MzTab> validator, MzTabWriterDefaults writerDefaults, boolean skipWriteOnValidationFailure)	Uses the provided validator and writerDefaults.

Uses of Validator in de.isas.mztab2.validation

Classes in de.isas.mztab2.validation that implement Validator

Modifier and Type	Class	Description
class	CvDefinitionValidationHandler	Validates that controlled vocabularies used by parameters are defined in the metadata CV section.
class	CvMappingValidator	Validator implementation that uses a provided xml mapping file with rules for required, recommended and optional CV parameters to assert that an mzTab follows these rules.
class	MzTabBeanValidator	This validator used the HibernateValidator bean validation reference implementation.

Methods in de.isas.mztab2.validation with parameters of type Validator

Modifier and Type	Method	Description
CvMappingValidator	CvMappingValidator.withPostValidator(Validator<MzTab> postValidator)	Add the provided validator implementation to the list of validators that run last.
CvMappingValidator	CvMappingValidator.withPreValidator(Validator<MzTab> preValidator)	Add the provided validator implementation to the list of validators that run first.