001/* 
002 * Copyright 2018 Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V..
003 *
004 * Licensed under the Apache License, Version 2.0 (the "License");
005 * you may not use this file except in compliance with the License.
006 * You may obtain a copy of the License at
007 *
008 *      http://www.apache.org/licenses/LICENSE-2.0
009 *
010 * Unless required by applicable law or agreed to in writing, software
011 * distributed under the License is distributed on an "AS IS" BASIS,
012 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
013 * See the License for the specific language governing permissions and
014 * limitations under the License.
015 */
016package de.isas.mztab2.io.serialization;
017
018import com.fasterxml.jackson.core.JsonGenerator;
019import com.fasterxml.jackson.databind.SerializerProvider;
020import com.fasterxml.jackson.databind.jsontype.TypeSerializer;
021import com.fasterxml.jackson.databind.ser.std.StdSerializer;
022import de.isas.mztab2.model.SampleProcessing;
023import java.io.IOException;
024import lombok.extern.slf4j.Slf4j;
025import uk.ac.ebi.pride.jmztab2.model.Section;
026
027/**
028 * <p>SampleProcessingSerializer implementation for {@link de.isas.mztab2.model.SampleProcessing}.</p>
029 *
030 * @author nilshoffmann
031 * 
032 */
033@Slf4j
034public class SampleProcessingSerializer extends StdSerializer<SampleProcessing> {
035
036    /**
037     * <p>Constructor for SampleProcessingSerializer.</p>
038     */
039    public SampleProcessingSerializer() {
040        this(null);
041    }
042
043    /**
044     * <p>Constructor for SampleProcessingSerializer.</p>
045     *
046     * @param t a {@link java.lang.Class} object.
047     */
048    public SampleProcessingSerializer(Class<SampleProcessing> t) {
049        super(t);
050    }
051    
052    @Override
053    public void serializeWithType(SampleProcessing value, JsonGenerator gen,
054        SerializerProvider serializers, TypeSerializer typeSer) throws IOException {
055        typeSer.writeTypePrefixForObject(value, gen);
056        serialize(value, gen, serializers);
057        typeSer.writeTypeSuffixForObject(value, gen);
058    }
059
060    /** {@inheritDoc} */
061    @Override
062    public void serialize(SampleProcessing sampleProcessing, JsonGenerator jg,
063        SerializerProvider sp) throws IOException {
064        if (sampleProcessing != null) {
065            Serializers.checkIndexedElement(sampleProcessing);
066            Serializers.addIndexedLine(jg, sp, Section.Metadata.getPrefix(),
067                sampleProcessing,
068                sampleProcessing.getSampleProcessing());
069        } else {
070            log.debug(SampleProcessing.class.getSimpleName()+" is null!");
071        }
072    }
073}