Package uk.ac.ebi.pride.jmztab2.utils.errors

This package contains error type definitions and related classes used during mzTab validation.

Class Summary

Class	Description
CrossCheckErrorType	Provide crosscheck service, that is parse the consistent between current mztab file and some other resource (eg, database, xml file and so on).
FormatErrorType	Diagnose different types of format-related (reporting format problems).
LogicalErrorType	Reporting errors related to the logical relationships among the different sections in a file.
MZTabError	mzTab files can be validated to ensure that they comply with the latest version of the format specification.
MZTabErrorList	A limit max capacity list, if contains a couple of MZTabError objects.
MZTabErrorType	MZTabErrorType class.
MZTabErrorTypeMap	This list class used to storage all types of MZTabError, and provide query service based on the error/warn code.

Enum Summary

Enum	Description
MZTabErrorType.Category
MZTabErrorType.Level	We classify diagnosis message types into three levels: Info, Warn and Error, all of them coming from the notational conventions of the specification.

Exception Summary

Exception	Description
MZTabConversionException	Runtime exception for mzTab conversion
MZTabErrorOverflowException	If error count great than MZTabProperties.MAX_ERROR_COUNT System will stop validate and throw overflow exception.
MZTabException	Wrap a MZTabError.