Uses of Class
de.isas.mztab2.model.StudyVariable

Packages that use StudyVariable

Package	Description
de.isas.mztab2.model	Base package for the jmztab-m data model, generated from the mzTab_m_swagger.yml specification.

Uses of StudyVariable in de.isas.mztab2.model

Methods in de.isas.mztab2.model that return StudyVariable

Modifier and Type	Method	Description
StudyVariable	StudyVariable.addAssayRefsItem(Assay assayRefsItem)	Add a single assayRefsItem to the assayRefs collection.
StudyVariable	StudyVariable.addFactorsItem(Parameter factorsItem)	Add a single factorsItem to the factors collection.
StudyVariable	StudyVariable.assayRefs(List<Assay> assayRefs)	Builder method for assayRefs.
StudyVariable	StudyVariable.averageFunction(Parameter averageFunction)	Builder method for averageFunction.
StudyVariable	StudyVariable.description(String description)	Builder method for description.
StudyVariable	StudyVariable.factors(List<Parameter> factors)	Builder method for factors.
StudyVariable	StudyVariable.id(Integer id)	Builder method for id.
StudyVariable	StudyVariable.name(String name)	Builder method for name.
StudyVariable	StudyVariable.variationFunction(Parameter variationFunction)	Builder method for variationFunction.

Methods in de.isas.mztab2.model that return types with arguments of type StudyVariable

Modifier and Type	Method	Description
@NotNull @Valid List<StudyVariable>	Metadata.getStudyVariable()	Specification of study_variable.
Optional<StudyVariable>	MzTabAccess.getStudyVariableFor(Integer id, Metadata metadata)	Tries to locate the study variable referenced by id from the metadata section.

Methods in de.isas.mztab2.model with parameters of type StudyVariable

Modifier and Type	Method	Description
Metadata	Metadata.addStudyVariableItem(StudyVariable studyVariableItem)	Add a single studyVariableItem to the studyVariable collection.
Double	MzTabAccess.getAbundanceFor(StudyVariable studyVariable, SmallMoleculeSummary sms)	Retrieves the abundance value for the provided study variable and small molecule summary object.
Double	MzTabAccess.getAbundanceVariationFor(StudyVariable studyVariable, SmallMoleculeSummary sms)	Retrieves the abundance variation value for the provided study variable and small molecule summary object.

Method parameters in de.isas.mztab2.model with type arguments of type StudyVariable

Modifier and Type	Method	Description
void	Metadata.setStudyVariable(List<StudyVariable> studyVariable)	Set studyVariable.
Metadata	Metadata.studyVariable(List<StudyVariable> studyVariable)	Builder method for studyVariable.