Uses of Class
de.isas.lipidomics.domain.LipidLevel

Packages that use LipidLevel

Package	Description
de.isas.lipidomics.domain	This package contains the main common domain models for lipids.

Uses of LipidLevel in de.isas.lipidomics.domain

Methods in de.isas.lipidomics.domain that return LipidLevel

Modifier and Type	Method	Description
static LipidLevel	LipidLevel.valueOf(String name)	Returns the enum constant of this type with the specified name.
static LipidLevel[]	LipidLevel.values()	Returns an array containing the constants of this enum type, in the order they are declared.

Methods in de.isas.lipidomics.domain with parameters of type LipidLevel

Modifier and Type	Method	Description
protected String	LipidSpecies.buildLipidString(LipidLevel level, String headGroup, boolean isNormalized)
protected String	LipidMolecularSubspecies.buildLipidSubspeciesName(LipidLevel level, String faSeparator, String headGroup, boolean isNormalized)
String	FattyAcid.buildSubstructureName(LipidLevel level)	Build the name of this substructure.
String	LipidSpeciesInfo.buildSubstructureName(LipidLevel level)
String	LipidAdduct.getLipidFragmentString(LipidLevel level)	Returns the non-normalized lipid adduct name (original head group) with fragment, if available, for the given level.
String	LipidAdduct.getLipidString(LipidLevel level)	Returns the non-normalized (original head group) lipid name for the given level.
String	LipidIsomericSubspecies.getLipidString(LipidLevel level)
String	LipidIsomericSubspecies.getLipidString(LipidLevel level, boolean normalizeHeadGroup)
String	LipidMolecularSubspecies.getLipidString(LipidLevel level)
String	LipidMolecularSubspecies.getLipidString(LipidLevel level, boolean normalizeHeadGroup)
String	LipidSpecies.getLipidString(LipidLevel level)	Returns a lipid string representation for the given LipidLevel, e.g.
String	LipidSpecies.getLipidString(LipidLevel level, boolean normalizeHeadGroup)	Returns a lipid string representation for the given LipidLevel, e.g.
String	LipidStructuralSubspecies.getLipidString(LipidLevel level)
String	LipidStructuralSubspecies.getLipidString(LipidLevel level, boolean normalizeHeadGroup)
String	LipidAdduct.getNormalizedLipidFragmentString(LipidLevel level)	Returns the normalized lipid adduct name (class name as head group) with fragment for the given level.
String	LipidAdduct.getNormalizedLipidString(LipidLevel level)	Returns the normalized (class name as head group) lipid name for the given level.

Constructors in de.isas.lipidomics.domain with parameters of type LipidLevel

Constructor	Description
LipidSpeciesInfo(LipidLevel level, int nCarbon, int nHydroxy, int nDoubleBonds, LipidFaBondType lipidFaBondType)	Create a new LipidSpeciesInfo on the provided level.The name is inferred from the level.
LipidSpeciesInfo(LipidLevel level, String name, int position, int nCarbon, int nHydroxy, int nDoubleBonds, LipidFaBondType lipidFaBondType, boolean lcb, ModificationsList modifications)	Create a new LipidSpeciesInfo on the provided level.
LipidSpeciesInfo(LipidLevel level, String name, int position, int nCarbon, int nHydroxy, LipidFaBondType lipidFaBondType, boolean lcb, ModificationsList modifications, int nDoubleBonds, Map<Integer,String> doubleBondPositions)	Create a new LipidSpeciesInfo on the provided level.