Package de.isas.mztab2.model

Class SampleProcessing

java.lang.Object

de.isas.mztab2.model.IndexedElement

de.isas.mztab2.model.SampleProcessing

@Generated(value="io.swagger.codegen.languages.JavaClientCodegen",
           date="2020-02-11T15:11:41.249+01:00")
public class SampleProcessing
extends IndexedElement

A list of parameters describing a sample processing, preparation or handling step similar to a biological or analytical methods report. The order of the sample_processing items should reflect the order these processing steps were performed in. If multiple parameters are given for a step these MUST be separated by a “|”. If derivatization was performed, it MUST be reported here as a general step, e.g. 'silylation' and the actual derivatization agens MUST be specified in the Section 6.2.54 part.

mzTab-M specification example(s):

MTD     sample_processing[1]    [MSIO, MSIO:0000107, metabolism quenching using precooled 60 percent methanol ammonium bicarbonate buffer,]
MTD     sample_processing[2]    [MSIO, MSIO:0000146, centrifugation,]
MTD     sample_processing[3]    [MSIO, MSIO:0000141, metabolite extraction,]
MTD     sample_processing[4]    [MSIO, MSIO:0000141, silylation,]

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	SampleProcessing.Properties	Property enumeration for SampleProcessing.

Constructor Summary

Constructors

Constructor	Description
SampleProcessing()

Method Summary

Modifier and Type	Method	Description
SampleProcessing	addSampleProcessingItem(Parameter sampleProcessingItem)	Add a single sampleProcessingItem to the sampleProcessing collection.
SampleProcessing	elementType(String elementType)	Builder method for elementType.
boolean	equals(Object o)
@Valid List<Parameter>	getSampleProcessing()	Parameters specifiying sample processing that was applied within one step.
int	hashCode()
SampleProcessing	id(Integer id)	Builder method for id.
SampleProcessing	sampleProcessing(List<Parameter> sampleProcessing)	Builder method for sampleProcessing.
void	setSampleProcessing(List<Parameter> sampleProcessing)	Set sampleProcessing.
String	toString()

Methods inherited from class de.isas.mztab2.model.IndexedElement

getElementType, getId, setElementType, setId

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

SampleProcessing

public SampleProcessing()

Method Detail

id

public SampleProcessing id(Integer id)

Description copied from class: IndexedElement

Builder method for id.

Overrides:

id in class IndexedElement

Parameters:

id - a Integer parameter.

Returns:

IndexedElement

See Also:

IndexedElement#setId for specification examples, IndexedElement#getId for validation constraints

elementType

public SampleProcessing elementType(String elementType)

Description copied from class: IndexedElement

Builder method for elementType.

Overrides:

elementType in class IndexedElement

Parameters:

elementType - a String parameter.

Returns:

IndexedElement

See Also:

IndexedElement#setElementType for specification examples, IndexedElement#getElementType for validation constraints

sampleProcessing

public SampleProcessing sampleProcessing(List<Parameter> sampleProcessing)

Builder method for sampleProcessing.

Parameters:

sampleProcessing - a List<Parameter> parameter.

Returns:

SampleProcessing

See Also:

SampleProcessing#setSampleProcessing for specification examples, SampleProcessing#getSampleProcessing for validation constraints

addSampleProcessingItem

public SampleProcessing addSampleProcessingItem(Parameter sampleProcessingItem)

Add a single sampleProcessingItem to the sampleProcessing collection.

Parameters:

sampleProcessingItem - a Parameter parameter.

Returns:

SampleProcessing

See Also:

SampleProcessing#getSampleProcessing for validation constraints

getSampleProcessing

@Valid
public @Valid List<Parameter> getSampleProcessing()

Parameters specifiying sample processing that was applied within one step.

Returns:

sampleProcessing

setSampleProcessing

public void setSampleProcessing(List<Parameter> sampleProcessing)

Set sampleProcessing.

Parameters:

sampleProcessing - a List<Parameter> parameter.

See Also:

SampleProcessing#getSampleProcessing for validation constraints

equals

public boolean equals(Object o)

Overrides:

equals in class IndexedElement

hashCode

public int hashCode()

Overrides:

hashCode in class IndexedElement

toString

public String toString()

Overrides:

toString in class IndexedElement