Package de.isas.mztab2.model

Class OptColumnMapping

java.lang.Object

de.isas.mztab2.model.OptColumnMapping

@Generated(value="io.swagger.codegen.languages.JavaClientCodegen",
           date="2020-02-11T15:12:05.057+01:00")
public class OptColumnMapping
extends Object

Additional columns can be added to the end of the small molecule table. These column headers MUST start with the prefix “opt_” followed by the {identifier} of the object they reference: assay, study variable, MS run or “global” (if the value relates to all replicates). Column names MUST only contain the following characters: ‘A’-‘Z’, ‘a’-‘z’, ‘0’-‘9’, ‘’, ‘-’, ‘[’, ‘]’, and ‘:’. CV parameter accessions MAY be used for optional columns following the format: opt{identifier}_cv_{accession}_\{parameter name}. Spaces within the parameter’s name MUST be replaced by ‘_’.

mzTab-M specification example(s):

SMH     SML_ID  …       opt_assay[1]_my_value   …       opt_global_another_value
SML     1       …       My value        …       some other value

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	OptColumnMapping.Properties	Property enumeration for OptColumnMapping.

Constructor Summary

Constructors

Constructor	Description
OptColumnMapping()

Method Summary

Modifier and Type	Method	Description
boolean	equals(Object o)
@NotNull String	getIdentifier()	The fully qualified column name.
@Valid Parameter	getParam()	The (optional) parameter for this column.
String	getValue()	The value for this column in a particular row.
int	hashCode()
OptColumnMapping	identifier(String identifier)	Builder method for identifier.
OptColumnMapping	param(Parameter param)	Builder method for param.
void	setIdentifier(String identifier)	Set identifier.
void	setParam(Parameter param)	Set param.
void	setValue(String value)	Set value.
String	toString()
OptColumnMapping	value(String value)	Builder method for value.

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

OptColumnMapping

public OptColumnMapping()

Method Detail

identifier

public OptColumnMapping identifier(String identifier)

Builder method for identifier.

Parameters:

identifier - a String parameter.

Returns:

OptColumnMapping

See Also:

OptColumnMapping#setIdentifier for specification examples, OptColumnMapping#getIdentifier for validation constraints

getIdentifier

@NotNull
public @NotNull String getIdentifier()

The fully qualified column name.

Returns:

identifier

setIdentifier

public void setIdentifier(String identifier)

Set identifier.

Parameters:

identifier - a String parameter.

See Also:

OptColumnMapping#getIdentifier for validation constraints

param

public OptColumnMapping param(Parameter param)

Builder method for param.

Parameters:

param - a Parameter parameter.

Returns:

OptColumnMapping

See Also:

OptColumnMapping#setParam for specification examples, OptColumnMapping#getParam for validation constraints

getParam

@Valid
public @Valid Parameter getParam()

The (optional) parameter for this column.

Returns:

param

setParam

public void setParam(Parameter param)

Set param.

Parameters:

param - a Parameter parameter.

See Also:

OptColumnMapping#getParam for validation constraints

value

public OptColumnMapping value(String value)

Builder method for value.

Parameters:

value - a String parameter.

Returns:

OptColumnMapping

See Also:

OptColumnMapping#setValue for specification examples, OptColumnMapping#getValue for validation constraints

getValue

public String getValue()

The value for this column in a particular row.

Returns:

value

setValue

public void setValue(String value)

Set value.

Parameters:

value - a String parameter.

See Also:

OptColumnMapping#getValue for validation constraints

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object