Uses of Class
de.isas.mztab2.model.Database

Packages that use Database

Package	Description
de.isas.mztab2.io.serialization	This package contains classes that implement custom Jackson serializers for the mzTab-M model objects.
de.isas.mztab2.model	Base package for the jmztab-m data model, generated from the mzTab_m_swagger.yml specification.
uk.ac.ebi.pride.jmztab2.utils.parser	This package contains text file line parser implementations for the mzTab-M document sections.

Uses of Database in de.isas.mztab2.io.serialization

Methods in de.isas.mztab2.io.serialization with parameters of type Database

Modifier and Type	Method	Description
void	DatabaseSerializer.serialize(Database database, com.fasterxml.jackson.core.JsonGenerator jg, com.fasterxml.jackson.databind.SerializerProvider sp)
void	DatabaseSerializer.serializeWithType(Database value, com.fasterxml.jackson.core.JsonGenerator gen, com.fasterxml.jackson.databind.SerializerProvider serializers, com.fasterxml.jackson.databind.jsontype.TypeSerializer typeSer)

Constructor parameters in de.isas.mztab2.io.serialization with type arguments of type Database

Constructor	Description
DatabaseSerializer(Class<Database> t)	Constructor for DatabaseSerializer.

Uses of Database in de.isas.mztab2.model

Methods in de.isas.mztab2.model that return Database

Modifier and Type	Method	Description
Database	Database.id(Integer id)	Builder method for id.
Database	Database.param(Parameter param)	Builder method for param.
Database	Database.prefix(String prefix)	Builder method for prefix.
Database	Database.uri(String uri)	Builder method for uri.
Database	Database.version(String version)	Builder method for version.

Methods in de.isas.mztab2.model that return types with arguments of type Database

Modifier and Type	Method	Description
@NotNull @Valid List<Database>	Metadata.getDatabase()	Specification of databases.
Optional<Database>	MzTabAccess.getDatabaseFor(Integer id, Metadata metadata)	Tries to locate the database referenced by id from the metadata section.

Methods in de.isas.mztab2.model with parameters of type Database

Modifier and Type	Method	Description
Metadata	Metadata.addDatabaseItem(Database databaseItem)	Add a single databaseItem to the database collection.

Method parameters in de.isas.mztab2.model with type arguments of type Database

Modifier and Type	Method	Description
Metadata	Metadata.database(List<Database> database)	Builder method for database.
void	Metadata.setDatabase(List<Database> database)	Set database.

Uses of Database in uk.ac.ebi.pride.jmztab2.utils.parser

Methods in uk.ac.ebi.pride.jmztab2.utils.parser that return Database

Modifier and Type	Method	Description
Database	MZTabParserContext.addDatabase(Metadata metadata, Database database)	addDatabase.
Database	MZTabParserContext.addDatabasePrefix(Metadata metadata, Integer id, String valueLabel)	addDatabasePrefix.
Database	MZTabParserContext.addDatabaseUri(Metadata metadata, Integer id, URI checkURI)	addDatabaseUri.
Database	MZTabParserContext.addDatabaseVersion(Metadata metadata, Integer id, String version)	addDatabaseVersion.

Methods in uk.ac.ebi.pride.jmztab2.utils.parser with parameters of type Database

Modifier and Type	Method	Description
Database	MZTabParserContext.addDatabase(Metadata metadata, Database database)	addDatabase.