Uses of Class
de.isas.mztab2.model.Publication

Packages that use Publication

Package	Description
de.isas.mztab2.io.serialization	This package contains classes that implement custom Jackson serializers for the mzTab-M model objects.
de.isas.mztab2.model	Base package for the jmztab-m data model, generated from the mzTab_m_swagger.yml specification.
uk.ac.ebi.pride.jmztab2.model	This package contains model classes for mzTab-M structural features like mandatory and optional columns.
uk.ac.ebi.pride.jmztab2.utils.parser	This package contains text file line parser implementations for the mzTab-M document sections.

Uses of Publication in de.isas.mztab2.io.serialization

Methods in de.isas.mztab2.io.serialization with parameters of type Publication

Modifier and Type	Method	Description
void	PublicationSerializer.serialize(Publication publication, com.fasterxml.jackson.core.JsonGenerator jg, com.fasterxml.jackson.databind.SerializerProvider sp)
void	PublicationSerializer.serializeWithType(Publication value, com.fasterxml.jackson.core.JsonGenerator gen, com.fasterxml.jackson.databind.SerializerProvider serializers, com.fasterxml.jackson.databind.jsontype.TypeSerializer typeSer)

Constructor parameters in de.isas.mztab2.io.serialization with type arguments of type Publication

Constructor	Description
PublicationSerializer(Class<Publication> t)	Constructor for PublicationSerializer.

Uses of Publication in de.isas.mztab2.model

Methods in de.isas.mztab2.model that return Publication

Modifier and Type	Method	Description
Publication	Publication.addPublicationItemsItem(PublicationItem publicationItemsItem)	Add a single publicationItemsItem to the publicationItems collection.
Publication	Publication.id(Integer id)	Builder method for id.
Publication	Publication.publicationItems(List<PublicationItem> publicationItems)	Builder method for publicationItems.

Methods in de.isas.mztab2.model that return types with arguments of type Publication

Modifier and Type	Method	Description
@Valid List<Publication>	Metadata.getPublication()	A publication associated with this file.

Methods in de.isas.mztab2.model with parameters of type Publication

Modifier and Type	Method	Description
Metadata	Metadata.addPublicationItem(Publication publicationItem)	Add a single publicationItem to the publication collection.

Method parameters in de.isas.mztab2.model with type arguments of type Publication

Modifier and Type	Method	Description
Metadata	Metadata.publication(List<Publication> publication)	Builder method for publication.
void	Metadata.setPublication(List<Publication> publication)	Set publication.

Uses of Publication in uk.ac.ebi.pride.jmztab2.model

Methods in uk.ac.ebi.pride.jmztab2.model that return Publication

Modifier and Type	Method	Description
static Publication	MZTabUtils.parsePublicationItems(Publication publication, int lineNumber, String target)	A publication on this unit.

Methods in uk.ac.ebi.pride.jmztab2.model with parameters of type Publication

Modifier and Type	Method	Description
static Publication	MZTabUtils.parsePublicationItems(Publication publication, int lineNumber, String target)	A publication on this unit.

Uses of Publication in uk.ac.ebi.pride.jmztab2.utils.parser

Methods in uk.ac.ebi.pride.jmztab2.utils.parser that return Publication

Modifier and Type	Method	Description
Publication	MZTabParserContext.addPublication(Metadata metadata, Publication publication)	Add a publiction to metadata.
Publication	MZTabParserContext.addPublicationItem(Metadata metadata, Integer id, PublicationItem.TypeEnum type, String accession)	Add a publication item to metadata.
Publication	MZTabParserContext.addPublicationItems(Metadata metadata, Integer id, Collection<PublicationItem> items)	Add a couple of publication items into publication[id].

Methods in uk.ac.ebi.pride.jmztab2.utils.parser with parameters of type Publication

Modifier and Type	Method	Description
Publication	MZTabParserContext.addPublication(Metadata metadata, Publication publication)	Add a publiction to metadata.