Uses of Class
uk.ac.ebi.pride.jmztab2.model.MetadataElement

Packages that use MetadataElement

Package	Description
de.isas.mztab2.io.serialization	This package contains classes that implement custom Jackson serializers for the mzTab-M model objects.
uk.ac.ebi.pride.jmztab2.model	This package contains model classes for mzTab-M structural features like mandatory and optional columns.
uk.ac.ebi.pride.jmztab2.utils.parser	This package contains text file line parser implementations for the mzTab-M document sections.

Uses of MetadataElement in de.isas.mztab2.io.serialization

Methods in de.isas.mztab2.io.serialization with parameters of type MetadataElement

Modifier and Type	Method	Description
static <T> void	MetadataSerializer.serializeListWithMetadataElement(List<T> list, MetadataElement mtdElement, com.fasterxml.jackson.core.JsonGenerator jg, com.fasterxml.jackson.databind.SerializerProvider sp, Comparator<? super T> comparator)	Serialize a list of Parameters for the provided metadata element.

Uses of MetadataElement in uk.ac.ebi.pride.jmztab2.model

Methods in uk.ac.ebi.pride.jmztab2.model that return MetadataElement

Modifier and Type	Method	Description
static MetadataElement	MetadataElement.findElement(String name)	Find element by name with case-insensitive match.
MetadataElement	MetadataProperty.getElement()	Getter for the field element.
static MetadataElement	MetadataElement.valueOf(String name)	Returns the enum constant of this type with the specified name.
static MetadataElement[]	MetadataElement.values()	Returns an array containing the constants of this enum type, in the order they are declared.

Methods in uk.ac.ebi.pride.jmztab2.model with parameters of type MetadataElement

Modifier and Type	Method	Description
static Optional<MetadataProperty>	MetadataProperty.findProperty(MetadataElement element, String propertyName)	Find property by MetadataElement and property name with case-insensitive.
static IndexedElement	MZTabUtils.parseIndexedElement(String target, MetadataElement element)	parse the target into a IndexedElement object.
static List<IndexedElement>	MZTabUtils.parseRefList(String target, MetadataElement element)	Parse the target into a IndexedElement list.

Uses of MetadataElement in uk.ac.ebi.pride.jmztab2.utils.parser

Methods in uk.ac.ebi.pride.jmztab2.utils.parser with parameters of type MetadataElement

Modifier and Type	Method	Description
protected void	MTDLineParser.handleAssay(Matcher matcher, String defineLabel, MetadataElement element, String valueLabel)
protected void	MTDLineParser.handleContact(String defineLabel, Matcher matcher, MetadataElement element, String valueLabel)
protected void	MTDLineParser.handleCv(String defineLabel, Matcher matcher, MetadataElement element, String valueLabel)
protected void	MTDLineParser.handleDatabase(String defineLabel, Matcher matcher, MetadataElement element, String valueLabel)
protected void	MTDLineParser.handleInstrument(String defineLabel, Matcher matcher, MetadataElement element, String valueLabel)
protected void	MTDLineParser.handleMsRun(String defineLabel, Matcher matcher, MetadataElement element, String valueLabel)
protected void	MTDLineParser.handleMzTab(MetadataElement element, Matcher matcher, String defineLabel, String valueLabel)
protected void	MTDLineParser.handleSample(String defineLabel, Matcher matcher, MetadataElement element, String valueLabel)
protected void	MTDLineParser.handleSmallMolecule(MetadataElement element, Matcher matcher, String defineLabel, String valueLabel)
protected void	MTDLineParser.handleSmallMoleculeFeature(MetadataElement element, Matcher matcher, String defineLabel, String valueLabel)
protected void	MTDLineParser.handleSoftware(String defineLabel, Matcher matcher, MetadataElement element, String valueLabel)
protected void	MTDLineParser.handleStudyVariable(String defineLabel, Matcher matcher, MetadataElement element, String valueLabel)