Class SpectraRef


  • @Generated(value="io.swagger.codegen.languages.JavaClientCodegen",
               date="2021-01-02T19:26:21.550+01:00")
    public class SpectraRef
    extends Object
    Reference to a spectrum in a spectrum file, for example a fragmentation spectrum has been used to support the identification. If a separate spectrum file has been used for fragmentation spectrum, this MUST be reported in the metadata section as additional ms_runs. The reference must be in the format ms_run[1-n]:{SPECTRA_REF} where SPECTRA_REF MUST follow the format defined in 5.2 (including references to chromatograms where these are used to inform identification). Multiple spectra MUST be referenced using a “|” delimited list for the (rare) cases in which search engines have combined or aggregated multiple spectra in advance of the search to make identifications. If a fragmentation spectrum has not been used, the value should indicate the ms_run to which is identification is mapped e.g. “ms_run[1]”.

    mzTab-M specification example(s):

    SEH     SME_ID  …       spectra_ref     …
    SME     1                       ms_run[1]:index=5       …